Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898995.1_cds_XP_016448937.1_43543
CDS Infomation

[gene=LOC107774007] [db_xref=GeneID:107774007] [protein=phosphatidylinositol 4-kinase alpha 1-like] [partial=5',3'] [protein_id=XP_016448937.1] [location=complement(join(<1880..2030,2126..2259,2426..2606,2832..3046,3869..4228,4356..4850,5298..5480,5578..5724,6214..6431,6576..6741,9381..9687,9767..9888,9982..10140,10281..10451,10830..>10880))] [gbkey=CDS]
Sequence

AGTCTAGCTTCCTTACTGGTTATTCAAGCTTTTATCCACTATTCTGGAAAGGTAGAGAAA
GAAAAGCAGGCAGCTCCTTTCCTGCAGTTGAACTTTATAAGGTTACTAGCTGATCTCAAA
TTTTCAATTAAGAGGCCTGAAGTTGTGGATGTGATATTGCCTTTCTTCATTGAAAGTTTA
GAGGAGGGTGATGCATCAGTACCAGGCTTATTGAGACTCCGACTTCTTGATGCTGTTGCT
CGCCTGGCGAGTTTAGGTTTTGAGAAGTCCTACCATGAAGCTGTTGTTCTGATGACAAGG
AGTTACTTAAGTAAGCTTGCTGCTGTTGGCTCAACTGAAAGTAAGACCACAGCTCTAGAA
GCCACAACAGAACGTATTGAGACACTTCCAACAGGATTTCTTCTGATTGCCAAATCCTTG
ACTACTCCTAAGTTGCGTACTGACTACCGTCATCGTTTGCTATCCCTGTGCTCAGATGTG
GGCTTGGCTACAGAGTCAATAAAGTGTGGAGCAGATTTTCTTGGTCCTCTCCTTCCTGCC
GTGGCTGAGATATGTTCAGATTCTGATCCTACTGTAGACGTTGAACCTTCACTTTTGAAG
TTGTTTAGAAACTTGTGGTTCTATGTCTCTCTCTTTGGGTTAGCTCCTCCATTACAGGAC
CATCATGGCATGACAAAGTCAGTATCAACTACTCTAAACAGTGTTGGCAGCACTGGAGCG
ATTGCCCTTCAAGCAGTGAGTGATCCAAACATGTGGAGTGCTGTTTGGTCCTCTGCTGTC
CAACGCATTTCTCAAGGAACCCCACCACTTGTTGTGAGCTCCATGAAGTGGCTTGAAGAT
GAGTTGGAACTAAGTGCTCTTCTTAAAGGTAGTCGGCGTGGTGGTGGCAATGAGAAAGGT
GCCGTTAGCCAAAGAACTGCTCTTTCTGCTGCTTTAAGAGGGTGTATGGAACTTTCAGCA
ATGAGGGCAATTTCCGGTGTCAAGTCAACTTATCTACTTGCAGTAGCATGTTTGGAGATA
ACACGGTTTAGTAGCAATGCTGGGATCCTCAATGTGGGCCCTAGTTCAACAGCTTCTAGA
AGTGCCTTCAGCTGTGTCTTTGAATACTTGAAAATTCCTGGCCTCACACCGGCTATCTCT
CAGTGCTTGACAGCCATTGTTCACAGTGCTTTTGAAAAAGCAGTAGCATGGCTGGAGGAG
ACTAGATCAAGAGCAGACTATAAGGAATCTACATTGACCACCCATGTCAGTTTTCTTTTA
AAAAGTTTGTCCCAAAGGAATGAGCATATACGAGATATCTCAGTTAACTTGTTGAATCAA
TTAAGAGATCGTTTTCCTCAGATTTTGTGGAACTCTTCTTGTCTAGATTCAGTATTATTT
TCAGTGCACAATGATCTGCCTTCATCTGCAATCAATGATTTTGCTTGCATGGCTACTATT
CGCTCCTTGTACCAAAGGACTGTTCGCGAATGGATGATTCTTTCACTTTCACAGGCTCCT
TGTACTAGTCAGGGGCTTCTTCAGGAAAAGCTTTGTAAAGCAAACGCTTGGCAAAAATCG
CAGCCTACAGAAGAAGTTGTTTCTCTCTTATCTGAAATAAAAATTGGTACTGGTAAAAAT
GACCACTGGACCGGAACAAAAACAGCAAATATTCCTGCTGTTATGGCTGCAGCAGCTGCA
GCATCTGGAGCAAAATTAAAATTGAGGGAGGCATTTAATTTCGAGGTGCTCAGTACTTGT
ATGATCAGTGCAACTGCGAAGTCTAATCATGCTGGTGAAATAGCTGGAATGAGAAGTTTA
TATGCGAGTTTTGGTAGCCTTGATCTCCCAGCTTCAGGTCCTGGTGATATGGTGGAACAT
TTGCAGCCAAAAACTGGGTCCTTTTCTGAGGTTTTACTTAAAAAGTTTGTCCGACTGCTC
CAGGAATTTATTAATGATGCAGAAAGAGGGAGAGAAGTAGATAAATCATCATTCCATGAA
ACTTGTTCTCAAGCAACTGCTTTTCTACTCTCTGATCTGGGATCAGATTCTAAATCAAAT
GTAGAAAGCTTTTCAAAACTTTTACGTCTTCTTTGCTGGAGCCCAGCTCATATATTGACA
TCCAATGCCATGGAGACTGGTGTATTTATTTGGACATGGTTGGTTTCAGCTGCTCCTCAA
TTGTGTTCTCTAGTACTTGCTGAGCTTGTTGATGCATGGTTGTCGACAGTCGACACAAAG
CGAGGTCTTTTTACATCTGAAGTTAGGTGTTGTGGACCTGCTGCTAAGTTAAGGCCTCAC
CTGGGACCTGGGGAGCCAGAAGCACCGCCTGAAAAGGATCCCGTTGAACAAATAATGGCC
CATAGACTATGGCTTGGGTTCTTTATTGATCGTTTTGAGGTCGTTCAACATGGTAGTGTT
TCACAGCTTTTACTTTTAGGGCGGTTGTTGCAAGGAACTATCACACTACCTTGGAATTTT
TCTTCCCACCCAGCTGCTACTGGCACATTTTTCACCCTCATGCTTCTTGGATTGAAGTTT
TGCTCATGCAAGTTACAGGGTAGTTTGCAAAACGTCATGGCTGGGTTTCAGCTTCTAGAA
GACAGAATATATCGGGCTTCATTGGGGTGGTTTGCTCACCAACCTGAGTGGTATGACATG
AATAAGAGCTTTGCGCTGAGTGAAATGCAGTCTGTATCTATGTTTGTCCATCATCTTTTG
AATGAGCAGTTAGATACTTCCCAACTCGATTTCAAAGGGCGGGCACTAGAAAATGGAAGC
TCTTTGAATGATGTGAAAGATCAACACCATCCTGTTTGGGGCCAAATGGAGTGCTATGCT
GTTGGGAGGGAGAAGCGGAAGCAGTTGCTTCTGATGTTATGCCAGCATGAAGCTGACAGG
CTTGATGTCTGGGCACAACCTACTGCCAAGGAAAGCACTTCACGTCTTAAAATCAGCTCT
GAGAAATGGGTCGATTTTGCTCGAACTGCCTTTTCTGTAGATCCCCGTATAGCTTTTTGT
CTTGCTGCAAGGTTTCCTACAAATAATCATCTGAAGGCTGAAGTAACACAATTGGTGCAG

Peptide Sequence

PEP ID

XP_016448937.1
PEP Infomation

PREDICTED: phosphatidylinositol 4-kinase alpha 1-like, partial [Nicotiana tabacum]
Sequence

SLASLLVIQAFIHYSGKVEKEKQAAPFLQLNFIRLLADLKFSIKRPEVVDVILPFFIESL
EEGDASVPGLLRLRLLDAVARLASLGFEKSYHEAVVLMTRSYLSKLAAVGSTESKTTALE
ATTERIETLPTGFLLIAKSLTTPKLRTDYRHRLLSLCSDVGLATESIKCGADFLGPLLPA
VAEICSDSDPTVDVEPSLLKLFRNLWFYVSLFGLAPPLQDHHGMTKSVSTTLNSVGSTGA
IALQAVSDPNMWSAVWSSAVQRISQGTPPLVVSSMKWLEDELELSALLKGSRRGGGNEKG
AVSQRTALSAALRGCMELSAMRAISGVKSTYLLAVACLEITRFSSNAGILNVGPSSTASR
SAFSCVFEYLKIPGLTPAISQCLTAIVHSAFEKAVAWLEETRSRADYKESTLTTHVSFLL
KSLSQRNEHIRDISVNLLNQLRDRFPQILWNSSCLDSVLFSVHNDLPSSAINDFACMATI
RSLYQRTVREWMILSLSQAPCTSQGLLQEKLCKANAWQKSQPTEEVVSLLSEIKIGTGKN
DHWTGTKTANIPAVMAAAAAASGAKLKLREAFNFEVLSTCMISATAKSNHAGEIAGMRSL
YASFGSLDLPASGPGDMVEHLQPKTGSFSEVLLKKFVRLLQEFINDAERGREVDKSSFHE
TCSQATAFLLSDLGSDSKSNVESFSKLLRLLCWSPAHILTSNAMETGVFIWTWLVSAAPQ
LCSLVLAELVDAWLSTVDTKRGLFTSEVRCCGPAAKLRPHLGPGEPEAPPEKDPVEQIMA
HRLWLGFFIDRFEVVQHGSVSQLLLLGRLLQGTITLPWNFSSHPAATGTFFTLMLLGLKF
CSCKLQGSLQNVMAGFQLLEDRIYRASLGWFAHQPEWYDMNKSFALSEMQSVSMFVHHLL
NEQLDTSQLDFKGRALENGSSLNDVKDQHHPVWGQMECYAVGREKRKQLLLMLCQHEADR
LDVWAQPTAKESTSRLKISSEKWVDFARTAFSVDPRIAFCLAARFPTNNHLKAEVTQLVQ

Transcript Sequence

Gene sequence data has not been registered.